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AgroFIMS: Your new companion for easy standardization of data collection and description

The Agronomy Field Information Management System (AgroFIMS) has been developed on CGIAR’s HiDAP (Highly-interactive Data Analysis Platform created by CGIAR’s International Potato Center, CIP). AgroFIMS draws fully on ontologies, particularly the Agronomy Ontology and the Crop Ontology. It consists of modules that represent the typical cycle of operations in agronomic trial management, and enables the creation of data collection sheets and digital data collection using the same ontology-based set of variables, terminology, units and protocols. AgroFIMS therefore:

• Standardizes data collection and description for easy aggregation and inter-linking across disparate datasets;
• Allows easy integration with HiDAP breeding data, or any other ontology-based datasets;
• Functions as a data staging repository, allowing data uploads with view/edit permissions;
• Enables data quality checks, statistical analysis of the data collected, and the generation of sophisticated statistics reports;
• Aligns a priori with CGIAR’s CG Core metadata schema;
• Enables easy upload to the institutional repositories, and much more.

Funding for AgroFIMS was provided by the Bill and Melinda Gates Foundation’s Open Access, Open Data Initiative, and the CGIAR Big Data Platform. Two user-testing workshops have been organized, with the most recent in March, with 14 participants including agronomists, crop modelers and developers from CGIAR centers (CIP, IITA, CIMMYT, Bioversity International, IFPRI), the University of Florida, and Rothamsted Research. A beta version will be released in summer for field testing and digital data collection using the KDSmart application developed in collaboration with  Diversity Arrays Technology

Go to AGROFIMS →

These guidelines were created from information collected from: review on best and emerging practices across various sectors in the fast changing landscape of privacy and ethics (130 external resources); privacy and ethic materials sourced from seven CGIAR centers; first draft was circulated for input and feedback across CGIAR and incorporated into this edition. It’s important to note that this is an evolving document, the next stage is to consult externally for further input.

These Guidelines are intended to assist agricultural researchers handle privacy and personally identifiable information (PII) in the research project data lifecycle.

• Check the guidelines →

• Don’t transfer data containing PII unless have explicit consent
• Don’t transfer data containing PII in the absence of a data sharing agreement identifying aspects such as purpose and scope of use, privacy protections measures, confidentiality and any limitations)
• Don’t reuse or transfer PII until any inconsistencies with the DMP-PII and/or purpose compatibility have been resolved (e.g. through updated ethics review or consent from participant)

• Don’t wait until the end of the project to assess archiving needs when time and resources may be limited
• Don’t assume the longevity of a particular format, future-proof your archives data
• Don’t forget to budget for archiving data, this should be done as part of your Data Management Plan

• Don’t include PII in public datasets unless absolutely necessary to preserve the data’s analytic potential, scientific utility or benefit to the participant (and subject to participants informed consent and a rigorous risk assessment)

Don’t store data in unsecured locations or on unsecured devices or servers

Don’t store encrypted data and encryption keys in locations where they can be easily accessed simultaneously

Don’t underestimate the importance and value of administrative safeguards to standardize practices (i.e. organizational policies, procedures and maintenance of security measures that are designed to protect private information, data and access)

• Don’t collect PII unless you have a Data Management Plan and any necessary approvals in place, including the recorded approval of the potential participant
• Don’t collect PII unless you absolutely need it
• Don’t assume that removal of direct identifiers is sufficient to anonymize data or that all de-identification techniques will result in anonymized data. Consider the risk of re-identification of a research participant, particularly if datasets are combined. If there is a reasonable risk of re-identification the information should be handled as PII (i.e. undertake risk analysis, evaluate stronger anonymization techniques, seek informed consent for the disclosure of data and explain its possible consequences)
• Don’t include vulnerable participants or communities if their ability or capacity to provide voluntary informed consent is genuinely in question
• Don’t underestimate the potential of quasi or indirect identifiers to identify an individual, particularly the inherent ability of location-based data to identify participants and their communities, and the increased risk of harm this may pose to potentially vulnerable individuals/communities
• Avoid seeking overly broad consent that may call into question transparency or a research participant’s understanding regarding the use of their PII, be specific regarding the activities, purpose and limitations associated with PII so that the participant can make a genuinely informed decision and downstream users can evaluate purpose compatibility and seek fresh consent if needed

• Don’t leave the handling of PII and privacy protection as an after-thought, plan ahead!
• Don’t forget to check local laws and donor or third-party requirements in addition to institutional policies governing research ethics and privacy protection (seek expert support if unsure!)
• Don’t ignore ethical practices/standards, if your institution does not have an ethics framework or clearance process in place self-assess!
• In assessing whether information is capable of identifying someone (i.e. PII) don’t limit your focus to direct identifiers, also consider indirect/quasi identifiers. Appreciate this will depend on the context of the research project, the data in question and external data which is or may become otherwise available (i.e. there is no exhaustive list).
• In assessing risk of harm don’t forget to consider potential harm to the participant’s community or groups of individuals that can otherwise be identified or associated with the participant